Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
PKP4Q99569 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PKP4Q99569 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.35■□□□□ 0.53
PKP4Q99569 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.35■□□□□ 0.53
PKP4Q99569 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.35■□□□□ 0.53
PKP4Q99569 KRT8P9-201ENST00000558927 1449 ntBASIC18.35■□□□□ 0.53
PKP4Q99569 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 AC008622.2-201ENST00000617006 1229 ntBASIC18.35■□□□□ 0.53
PKP4Q99569 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.35■□□□□ 0.53
PKP4Q99569 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 AL512353.2-201ENST00000448759 1962 ntBASIC18.35■□□□□ 0.53
PKP4Q99569 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PKP4Q99569 AC004408.2-201ENST00000623613 2777 ntBASIC18.35■□□□□ 0.53
PKP4Q99569 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PKP4Q99569 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PKP4Q99569 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PKP4Q99569 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 AC093503.3-201ENST00000624917 2352 ntBASIC18.34■□□□□ 0.53
PKP4Q99569 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.34■□□□□ 0.53
PKP4Q99569 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.34■□□□□ 0.53
PKP4Q99569 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PKP4Q99569 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.34■□□□□ 0.53
PKP4Q99569 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PKP4Q99569 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PKP4Q99569 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.34■□□□□ 0.53
PKP4Q99569 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.34■□□□□ 0.53
PKP4Q99569 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
PKP4Q99569 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.34■□□□□ 0.53
PKP4Q99569 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.34■□□□□ 0.53
PKP4Q99569 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PKP4Q99569 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.33■□□□□ 0.53
PKP4Q99569 KRT8P32-201ENST00000512863 1461 ntBASIC18.33■□□□□ 0.53
PKP4Q99569 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.33■□□□□ 0.53
PKP4Q99569 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PKP4Q99569 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PKP4Q99569 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.33■□□□□ 0.53
PKP4Q99569 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PKP4Q99569 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PKP4Q99569 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.33■□□□□ 0.53
PKP4Q99569 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.33■□□□□ 0.53
PKP4Q99569 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PKP4Q99569 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.33■□□□□ 0.52
PKP4Q99569 MMP23A-201ENST00000234610 1017 ntBASIC18.33■□□□□ 0.52
PKP4Q99569 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PKP4Q99569 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.33■□□□□ 0.52
PKP4Q99569 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.33■□□□□ 0.52
PKP4Q99569 CA15P1-201ENST00000481698 905 ntBASIC18.33■□□□□ 0.52
PKP4Q99569 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.33■□□□□ 0.52
PKP4Q99569 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PKP4Q99569 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.33■□□□□ 0.52
PKP4Q99569 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PKP4Q99569 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PKP4Q99569 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PKP4Q99569 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PKP4Q99569 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PKP4Q99569 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PKP4Q99569 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PKP4Q99569 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PKP4Q99569 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.33■□□□□ 0.52
PKP4Q99569 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.32■□□□□ 0.52
PKP4Q99569 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.32■□□□□ 0.52
PKP4Q99569 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.32■□□□□ 0.52
PKP4Q99569 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.32■□□□□ 0.52
PKP4Q99569 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.32■□□□□ 0.52
PKP4Q99569 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.32■□□□□ 0.52
PKP4Q99569 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.32■□□□□ 0.52
PKP4Q99569 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.32■□□□□ 0.52
PKP4Q99569 AC068587.9-201ENST00000641814 219 ntBASIC18.32■□□□□ 0.52
PKP4Q99569 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PKP4Q99569 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.32■□□□□ 0.52
PKP4Q99569 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
PKP4Q99569 CYP2D8P-201ENST00000433633 1490 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms