Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 MIR4785-201ENST00000585005 73 ntBASIC22.32■■□□□ 1.16
NEK1Q96PY6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.32■■□□□ 1.16
NEK1Q96PY6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.32■■□□□ 1.16
NEK1Q96PY6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
NEK1Q96PY6 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 RBM17P1-201ENST00000453646 1190 ntBASIC22.31■■□□□ 1.16
NEK1Q96PY6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 GRAMD4P8-201ENST00000605465 1115 ntBASIC22.31■■□□□ 1.16
NEK1Q96PY6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.31■■□□□ 1.16
NEK1Q96PY6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 MTMR9LP-203ENST00000426597 1545 ntBASIC22.31■■□□□ 1.16
NEK1Q96PY6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NEK1Q96PY6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
NEK1Q96PY6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC22.3■■□□□ 1.16
NEK1Q96PY6 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC22.3■■□□□ 1.16
NEK1Q96PY6 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 AC008622.2-201ENST00000617006 1229 ntBASIC22.3■■□□□ 1.16
NEK1Q96PY6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NEK1Q96PY6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.3■■□□□ 1.16
NEK1Q96PY6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.3■■□□□ 1.16
NEK1Q96PY6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NEK1Q96PY6 WIZP1-201ENST00000531444 2299 ntBASIC22.29■■□□□ 1.16
NEK1Q96PY6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 UNC93B2-201ENST00000285383 730 ntBASIC22.29■■□□□ 1.16
NEK1Q96PY6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 AP005242.2-201ENST00000580065 1175 ntBASIC22.29■■□□□ 1.16
NEK1Q96PY6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NEK1Q96PY6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC22.29■■□□□ 1.16
NEK1Q96PY6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NEK1Q96PY6 AC079598.2-202ENST00000546624 1451 ntBASIC22.28■■□□□ 1.16
NEK1Q96PY6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
NEK1Q96PY6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC22.28■■□□□ 1.16
NEK1Q96PY6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NEK1Q96PY6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NEK1Q96PY6 RCC2P3-201ENST00000418112 1537 ntBASIC22.28■■□□□ 1.16
NEK1Q96PY6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms