Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 AC005332.7-201ENST00000614046 2005 ntBASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
PRICKLE1Q96MT3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 TNXA-203ENST00000507684 2038 ntBASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 AC141257.4-201ENST00000634557 245 ntBASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 AC136944.6-201ENST00000634818 245 ntBASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 FP475955.4-201ENST00000623131 1990 ntBASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.46■□□□□ 0.71
PRICKLE1Q96MT3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 AC117947.1-201ENST00000427448 529 ntBASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 DUX4L26-201ENST00000489078 1255 ntBASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PRICKLE1Q96MT3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 AL023284.2-201ENST00000405850 579 ntBASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 BX664615.1-201ENST00000443558 458 ntBASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 AP000974.1-201ENST00000623909 2387 ntBASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PRICKLE1Q96MT3 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.43■□□□□ 0.7
PRICKLE1Q96MT3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms