Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPGRIP1Q96KN7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RPGRIP1Q96KN7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RPGRIP1Q96KN7 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPGRIP1Q96KN7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RPGRIP1Q96KN7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPGRIP1Q96KN7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 BX664615.1-201ENST00000443558 458 ntBASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 EGLN1P1-201ENST00000531623 762 ntBASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 AIRN-201ENST00000601203 4374 ntBASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 FSCN1P1-201ENST00000568912 1481 ntBASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
RPGRIP1Q96KN7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 KRT16P6-202ENST00000425692 1426 ntBASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 AC063952.2-201ENST00000498792 1227 ntBASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 KRT126P-201ENST00000549467 1181 ntBASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.74■□□□□ 0.91
RPGRIP1Q96KN7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.73■□□□□ 0.91
RPGRIP1Q96KN7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms