Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 CA15P1-201ENST00000481698 905 ntBASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 REXO1L10P-201ENST00000615707 1290 ntBASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 REXO1L12P-201ENST00000622156 912 ntBASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 AL109659.2-201ENST00000606809 1674 ntBASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 AC009113.1-201ENST00000570267 2443 ntBASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 AC005082.1-201ENST00000413042 2259 ntBASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM5Q96HC4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 TMEM191A-211ENST00000637163 1067 ntBASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM5Q96HC4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 RCC2P3-201ENST00000418112 1537 ntBASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 MFAP1P1-201ENST00000442257 1255 ntBASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 AL355355.2-201ENST00000442321 338 ntBASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 AC097488.1-201ENST00000507834 756 ntBASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 MYC-208ENST00000641036 567 ntBASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 AL357033.4-201ENST00000617703 1807 ntBASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM5Q96HC4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 AC026471.5-201ENST00000615068 467 ntBASIC18.4■□□□□ 0.54
PDLIM5Q96HC4 AC008622.2-201ENST00000617006 1229 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms