Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 AL023973.1-201ENST00000624619 620 ntBASIC19.83■□□□□ 0.77
SMARCD1Q96GM5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 AC008556.1-201ENST00000610908 2040 ntBASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SMARCD1Q96GM5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 RNF152P1-201ENST00000397754 604 ntBASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 AC140113.3-201ENST00000605663 199 ntBASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.82■□□□□ 0.76
SMARCD1Q96GM5 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 AC068587.9-201ENST00000641814 219 ntBASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SMARCD1Q96GM5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 AC011558.1-201ENST00000623459 338 ntBASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 AL590326.2-201ENST00000625139 305 ntBASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 HEIH-201ENST00000623091 1652 ntBASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.8■□□□□ 0.76
SMARCD1Q96GM5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms