Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 BID-214ENST00000617586 542 ntTSL 5 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 PCDHA12-202ENST00000613593 2588 ntBASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHMP6Q96FZ7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHMP6Q96FZ7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CHMP6Q96FZ7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 AC105020.6-201ENST00000621523 1217 ntBASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 AC124067.4-201ENST00000519691 2379 ntBASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHMP6Q96FZ7 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms