Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.41■□□□□ 0.7
IFT43Q96FT9 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 AC026271.3-201ENST00000571884 352 ntBASIC19.41■□□□□ 0.7
IFT43Q96FT9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 AC010331.1-201ENST00000611423 582 ntBASIC19.41■□□□□ 0.7
IFT43Q96FT9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 AL031985.4-201ENST00000642138 673 ntBASIC19.41■□□□□ 0.7
IFT43Q96FT9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 AC093503.3-201ENST00000624917 2352 ntBASIC19.41■□□□□ 0.7
IFT43Q96FT9 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 AC079598.2-202ENST00000546624 1451 ntBASIC19.41■□□□□ 0.7
IFT43Q96FT9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
IFT43Q96FT9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
IFT43Q96FT9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 RCN1P1-201ENST00000400413 996 ntBASIC19.4■□□□□ 0.7
IFT43Q96FT9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 AC004980.1-204ENST00000429707 299 ntBASIC19.4■□□□□ 0.7
IFT43Q96FT9 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.4■□□□□ 0.7
IFT43Q96FT9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
IFT43Q96FT9 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.4■□□□□ 0.7
IFT43Q96FT9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
IFT43Q96FT9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
IFT43Q96FT9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
IFT43Q96FT9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
IFT43Q96FT9 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.39■□□□□ 0.69
IFT43Q96FT9 FITM1-202ENST00000559294 800 ntBASIC19.39■□□□□ 0.69
IFT43Q96FT9 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.69
IFT43Q96FT9 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
IFT43Q96FT9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 LTB4R2-202ENST00000528054 3092 ntBASIC19.39■□□□□ 0.69
IFT43Q96FT9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.39■□□□□ 0.69
IFT43Q96FT9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.39■□□□□ 0.69
IFT43Q96FT9 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
IFT43Q96FT9 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.39■□□□□ 0.69
IFT43Q96FT9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT43Q96FT9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
IFT43Q96FT9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT43Q96FT9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT43Q96FT9 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
IFT43Q96FT9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms