Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.42■□□□□ 0.86
PGBD4Q96DM1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.42■□□□□ 0.86
PGBD4Q96DM1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
PGBD4Q96DM1 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.42■□□□□ 0.86
PGBD4Q96DM1 TEX21P-204ENST00000641479 1693 ntBASIC20.42■□□□□ 0.86
PGBD4Q96DM1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 RASA4DP-201ENST00000460726 1199 ntBASIC20.41■□□□□ 0.86
PGBD4Q96DM1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PGBD4Q96DM1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.4■□□□□ 0.86
PGBD4Q96DM1 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PGBD4Q96DM1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.39■□□□□ 0.86
PGBD4Q96DM1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.39■□□□□ 0.86
PGBD4Q96DM1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
PGBD4Q96DM1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PGBD4Q96DM1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.39■□□□□ 0.86
PGBD4Q96DM1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 AC125437.2-201ENST00000625180 2167 ntBASIC20.39■□□□□ 0.85
PGBD4Q96DM1 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.39■□□□□ 0.85
PGBD4Q96DM1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PGBD4Q96DM1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PGBD4Q96DM1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PGBD4Q96DM1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms