Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 AL157384.1-201ENST00000445995 2473 ntBASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
SNRNP40Q96DI7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 AC023511.2-201ENST00000618803 211 ntBASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNRNP40Q96DI7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SNRNP40Q96DI7 Z83836.1-201ENST00000624605 1642 ntBASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 AC104819.1-201ENST00000504587 486 ntBASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.92■□□□□ 0.3
SNRNP40Q96DI7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms