Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FOXRED1Q96CU9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 RNA5SP413-201ENST00000516373 109 ntBASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 AC060766.5-201ENST00000590539 871 ntBASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 AL121829.2-201ENST00000620908 328 ntBASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 AC073592.3-201ENST00000625118 1834 ntBASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.4■□□□□ 0.22
FOXRED1Q96CU9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
FOXRED1Q96CU9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
FOXRED1Q96CU9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
FOXRED1Q96CU9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 NOC2LP2-201ENST00000407594 1944 ntBASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 AC020916.1-201ENST00000587762 1774 ntBASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 ABALON-201ENST00000629058 1903 ntBASIC16.39■□□□□ 0.21
FOXRED1Q96CU9 AL162741.1-201ENST00000565563 1558 ntBASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.38■□□□□ 0.21
FOXRED1Q96CU9 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms