Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 GPAT2P1-201ENST00000444924 1672 ntBASIC20.28■□□□□ 0.84
SEMA4DQ92854 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 Z98044.1-201ENST00000632503 1764 ntBASIC20.28■□□□□ 0.84
SEMA4DQ92854 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SEMA4DQ92854 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.28■□□□□ 0.84
SEMA4DQ92854 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA4DQ92854 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA4DQ92854 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SEMA4DQ92854 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 AL023284.2-201ENST00000405850 579 ntBASIC20.27■□□□□ 0.84
SEMA4DQ92854 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.27■□□□□ 0.84
SEMA4DQ92854 ANO7L1-203ENST00000602586 1720 ntBASIC20.27■□□□□ 0.83
SEMA4DQ92854 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SEMA4DQ92854 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.27■□□□□ 0.83
SEMA4DQ92854 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.26■□□□□ 0.83
SEMA4DQ92854 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 AC010947.1-201ENST00000623454 693 ntBASIC20.26■□□□□ 0.83
SEMA4DQ92854 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SEMA4DQ92854 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
SEMA4DQ92854 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.25■□□□□ 0.83
SEMA4DQ92854 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SEMA4DQ92854 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC20.24■□□□□ 0.83
SEMA4DQ92854 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 AC008556.1-201ENST00000610908 2040 ntBASIC20.24■□□□□ 0.83
SEMA4DQ92854 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.24■□□□□ 0.83
SEMA4DQ92854 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.24■□□□□ 0.83
SEMA4DQ92854 MMP23A-201ENST00000234610 1017 ntBASIC20.24■□□□□ 0.83
SEMA4DQ92854 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.24■□□□□ 0.83
SEMA4DQ92854 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.24■□□□□ 0.83
SEMA4DQ92854 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SEMA4DQ92854 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SEMA4DQ92854 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 AL357033.4-201ENST00000617703 1807 ntBASIC20.24■□□□□ 0.83
SEMA4DQ92854 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 AL499627.1-201ENST00000569373 2188 ntBASIC20.24■□□□□ 0.83
SEMA4DQ92854 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SEMA4DQ92854 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SEMA4DQ92854 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.23■□□□□ 0.83
SEMA4DQ92854 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms