Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 LBH-202ENST00000401506 485 ntTSL 3 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 PTBP1P-201ENST00000554374 1601 ntBASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 TFP1-202ENST00000475455 1573 ntBASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE2Q8WXH0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 AC107918.4-202ENST00000641623 219 ntBASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 AC018553.1-201ENST00000616682 1458 ntBASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 KRT8P20-201ENST00000423953 1409 ntBASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 COQ6-210ENST00000554920 649 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 PPA1-206ENST00000625364 644 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 BASP1P1-201ENST00000430708 665 ntBASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 PAN3-AS1-201ENST00000563843 1351 ntBASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
SYNE2Q8WXH0 RBM17P3-201ENST00000417687 1192 ntBASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 ACTG1P14-201ENST00000446382 1122 ntBASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 KRT8P17-201ENST00000453110 1448 ntBASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC7.61□□□□□ -1.19
SYNE2Q8WXH0 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms