Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SCG3Q8WXD2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 AC104417.2-201ENST00000562989 1793 ntBASIC19.29■□□□□ 0.68
SCG3Q8WXD2 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SCG3Q8WXD2 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 AC097493.4-201ENST00000641197 219 ntBASIC19.28■□□□□ 0.68
SCG3Q8WXD2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCG3Q8WXD2 FZD10-202ENST00000539839 3282 ntBASIC19.27■□□□□ 0.68
SCG3Q8WXD2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 AC141586.3-201ENST00000562166 1838 ntBASIC19.27■□□□□ 0.68
SCG3Q8WXD2 AL138781.2-201ENST00000617896 1843 ntBASIC19.27■□□□□ 0.68
SCG3Q8WXD2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.27■□□□□ 0.68
SCG3Q8WXD2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.27■□□□□ 0.67
SCG3Q8WXD2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms