Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 PPOX-219ENST00000544598 813 ntTSL 2 BASIC23.27■■□□□ 1.32
SSH3Q8TE77 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC23.27■■□□□ 1.32
SSH3Q8TE77 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.27■■□□□ 1.32
SSH3Q8TE77 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
SSH3Q8TE77 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
SSH3Q8TE77 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
SSH3Q8TE77 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SSH3Q8TE77 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
SSH3Q8TE77 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
SSH3Q8TE77 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 AC005521.1-201ENST00000393351 872 ntBASIC23.26■■□□□ 1.31
SSH3Q8TE77 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SSH3Q8TE77 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SSH3Q8TE77 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
SSH3Q8TE77 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.26■■□□□ 1.31
SSH3Q8TE77 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 Z98044.1-201ENST00000632503 1764 ntBASIC23.25■■□□□ 1.31
SSH3Q8TE77 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 GPX4-207ENST00000589115 812 ntTSL 2 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
SSH3Q8TE77 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.25■■□□□ 1.31
SSH3Q8TE77 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
SSH3Q8TE77 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC23.24■■□□□ 1.31
SSH3Q8TE77 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC23.24■■□□□ 1.31
SSH3Q8TE77 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.24■■□□□ 1.31
SSH3Q8TE77 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 RCN1P1-201ENST00000400413 996 ntBASIC23.24■■□□□ 1.31
SSH3Q8TE77 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC23.24■■□□□ 1.31
SSH3Q8TE77 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.24■■□□□ 1.31
SSH3Q8TE77 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.24■■□□□ 1.31
SSH3Q8TE77 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
SSH3Q8TE77 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SSH3Q8TE77 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.23■■□□□ 1.31
SSH3Q8TE77 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.23■■□□□ 1.31
SSH3Q8TE77 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 KRT18P41-201ENST00000518924 1277 ntBASIC23.23■■□□□ 1.31
SSH3Q8TE77 AL512604.3-201ENST00000569583 964 ntBASIC23.23■■□□□ 1.31
SSH3Q8TE77 AC141257.4-201ENST00000634557 245 ntBASIC23.23■■□□□ 1.31
SSH3Q8TE77 AC136944.6-201ENST00000634818 245 ntBASIC23.23■■□□□ 1.31
SSH3Q8TE77 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC23.23■■□□□ 1.31
SSH3Q8TE77 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
SSH3Q8TE77 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
SSH3Q8TE77 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC23.23■■□□□ 1.31
SSH3Q8TE77 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SSH3Q8TE77 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SSH3Q8TE77 ANO7L1-203ENST00000602586 1720 ntBASIC23.22■■□□□ 1.31
SSH3Q8TE77 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms