Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 AC008687.6-201ENST00000596318 630 ntBASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RPS4Y2Q8TD47 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4Y2Q8TD47 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 AC097658.1-201ENST00000475555 843 ntBASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.51■□□□□ 0.23
RPS4Y2Q8TD47 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 AL499627.1-201ENST00000569373 2188 ntBASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 AC083880.1-201ENST00000608266 535 ntBASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.5■□□□□ 0.23
RPS4Y2Q8TD47 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 KRT8P32-201ENST00000512863 1461 ntBASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 POU5F1P3-201ENST00000428824 1078 ntBASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 SLC25A6P5-201ENST00000435663 894 ntBASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 SOX15-203ENST00000570788 1093 ntBASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.49■□□□□ 0.23
RPS4Y2Q8TD47 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms