Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CNIH3Q8TBE1 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 CYP2T1P-201ENST00000432607 1285 ntBASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CNIH3Q8TBE1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 AL499627.1-201ENST00000569373 2188 ntBASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 AC069236.1-201ENST00000604339 616 ntBASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.21■□□□□ 0.35
CNIH3Q8TBE1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CNIH3Q8TBE1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.21■□□□□ 0.34
CNIH3Q8TBE1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CNIH3Q8TBE1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CNIH3Q8TBE1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms