Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST2Q8NFU1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
BEST2Q8NFU1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
BEST2Q8NFU1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.28■□□□□ 0.84
BEST2Q8NFU1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.28■□□□□ 0.84
BEST2Q8NFU1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
BEST2Q8NFU1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 AC036111.1-201ENST00000533973 1582 ntBASIC20.27■□□□□ 0.84
BEST2Q8NFU1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 KRT8P32-201ENST00000512863 1461 ntBASIC20.27■□□□□ 0.84
BEST2Q8NFU1 RNF152P1-201ENST00000397754 604 ntBASIC20.27■□□□□ 0.84
BEST2Q8NFU1 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 AC063952.2-201ENST00000498792 1227 ntBASIC20.27■□□□□ 0.84
BEST2Q8NFU1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
BEST2Q8NFU1 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BEST2Q8NFU1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BEST2Q8NFU1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
BEST2Q8NFU1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
BEST2Q8NFU1 AL109659.2-201ENST00000606809 1674 ntBASIC20.26■□□□□ 0.83
BEST2Q8NFU1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 AC011558.1-201ENST00000623459 338 ntBASIC20.26■□□□□ 0.83
BEST2Q8NFU1 AL023973.1-201ENST00000624619 620 ntBASIC20.26■□□□□ 0.83
BEST2Q8NFU1 AL161938.1-201ENST00000569833 2180 ntBASIC20.26■□□□□ 0.83
BEST2Q8NFU1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
BEST2Q8NFU1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 TSPY5P-201ENST00000426936 936 ntBASIC20.25■□□□□ 0.83
BEST2Q8NFU1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 LINC01238-205ENST00000567549 1107 ntBASIC20.25■□□□□ 0.83
BEST2Q8NFU1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.25■□□□□ 0.83
BEST2Q8NFU1 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 AC022616.7-201ENST00000525383 220 ntBASIC20.24■□□□□ 0.83
BEST2Q8NFU1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
BEST2Q8NFU1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
BEST2Q8NFU1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.23■□□□□ 0.83
BEST2Q8NFU1 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
BEST2Q8NFU1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms