Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KLHDC9Q8NEP7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
KLHDC9Q8NEP7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KLHDC9Q8NEP7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
KLHDC9Q8NEP7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
KLHDC9Q8NEP7 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.81■□□□□ 0.92
KLHDC9Q8NEP7 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 LINC00167-201ENST00000530583 1419 ntBASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 RN7SL606P-201ENST00000472779 293 ntBASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 GPR32P1-201ENST00000601788 811 ntBASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
KLHDC9Q8NEP7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 Z82202.1-201ENST00000623446 1880 ntBASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 IGHGP-201ENST00000390555 1178 ntBASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 Z69720.1-201ENST00000601483 472 ntBASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 AC099336.1-202ENST00000602961 463 ntBASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.79■□□□□ 0.92
KLHDC9Q8NEP7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 KRT8P32-201ENST00000512863 1461 ntBASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 AKR1C7P-201ENST00000305623 895 ntBASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 HLA-A-201ENST00000376802 1334 ntBASIC20.78■□□□□ 0.92
KLHDC9Q8NEP7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.77■□□□□ 0.92
KLHDC9Q8NEP7 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.77■□□□□ 0.91
KLHDC9Q8NEP7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KLHDC9Q8NEP7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms