Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.51■□□□□ 0.23
CPEB3Q8NE35 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPEB3Q8NE35 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPEB3Q8NE35 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 AL390955.1-201ENST00000428694 934 ntBASIC16.49■□□□□ 0.23
CPEB3Q8NE35 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 TNXA-203ENST00000507684 2038 ntBASIC16.49■□□□□ 0.23
CPEB3Q8NE35 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPEB3Q8NE35 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 FITM1-202ENST00000559294 800 ntBASIC16.48■□□□□ 0.23
CPEB3Q8NE35 AP005242.2-201ENST00000580065 1175 ntBASIC16.48■□□□□ 0.23
CPEB3Q8NE35 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.48■□□□□ 0.23
CPEB3Q8NE35 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms