Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
RETREG2Q8NC44 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 COPS8-203ENST00000409334 794 ntTSL 5 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 CA15P1-201ENST00000481698 905 ntBASIC21.34■■□□□ 1.01
RETREG2Q8NC44 KRT126P-201ENST00000549467 1181 ntBASIC21.34■■□□□ 1.01
RETREG2Q8NC44 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 KRT8P41-201ENST00000533985 1514 ntBASIC21.34■■□□□ 1.01
RETREG2Q8NC44 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
RETREG2Q8NC44 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 FAM86EP-206ENST00000510506 987 ntBASIC21.33■■□□□ 1.01
RETREG2Q8NC44 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.33■■□□□ 1.01
RETREG2Q8NC44 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.33■■□□□ 1.01
RETREG2Q8NC44 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
RETREG2Q8NC44 IER3-202ENST00000376377 1350 ntBASIC21.33■■□□□ 1
RETREG2Q8NC44 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.33■■□□□ 1
RETREG2Q8NC44 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RETREG2Q8NC44 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
RETREG2Q8NC44 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.32■■□□□ 1
RETREG2Q8NC44 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RETREG2Q8NC44 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
RETREG2Q8NC44 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
RETREG2Q8NC44 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.32■■□□□ 1
RETREG2Q8NC44 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
RETREG2Q8NC44 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
RETREG2Q8NC44 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 KRT18P48-201ENST00000434763 852 ntBASIC21.32■■□□□ 1
RETREG2Q8NC44 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC21.32■■□□□ 1
RETREG2Q8NC44 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.32■■□□□ 1
RETREG2Q8NC44 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC21.32■■□□□ 1
RETREG2Q8NC44 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.32■■□□□ 1
RETREG2Q8NC44 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.32■■□□□ 1
RETREG2Q8NC44 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC21.32■■□□□ 1
RETREG2Q8NC44 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RETREG2Q8NC44 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.31■■□□□ 1
RETREG2Q8NC44 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
RETREG2Q8NC44 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.31■■□□□ 1
RETREG2Q8NC44 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RETREG2Q8NC44 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC21.31■■□□□ 1
RETREG2Q8NC44 AL671277.2-201ENST00000458060 996 ntBASIC21.31■■□□□ 1
RETREG2Q8NC44 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.31■■□□□ 1
RETREG2Q8NC44 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.31■■□□□ 1
RETREG2Q8NC44 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms