Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 RASA4DP-201ENST00000460726 1199 ntBASIC20.76■□□□□ 0.91
NME8Q8N427 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
NME8Q8N427 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
NME8Q8N427 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
NME8Q8N427 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.76■□□□□ 0.91
NME8Q8N427 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.75■□□□□ 0.91
NME8Q8N427 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.75■□□□□ 0.91
NME8Q8N427 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.75■□□□□ 0.91
NME8Q8N427 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.75■□□□□ 0.91
NME8Q8N427 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.75■□□□□ 0.91
NME8Q8N427 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.75■□□□□ 0.91
NME8Q8N427 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.75■□□□□ 0.91
NME8Q8N427 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
NME8Q8N427 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.74■□□□□ 0.91
NME8Q8N427 TEX21P-204ENST00000641479 1693 ntBASIC20.74■□□□□ 0.91
NME8Q8N427 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NME8Q8N427 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.74■□□□□ 0.91
NME8Q8N427 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.74■□□□□ 0.91
NME8Q8N427 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 HBZP1-201ENST00000354915 429 ntBASIC20.74■□□□□ 0.91
NME8Q8N427 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.74■□□□□ 0.91
NME8Q8N427 AC036111.1-201ENST00000533973 1582 ntBASIC20.74■□□□□ 0.91
NME8Q8N427 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NME8Q8N427 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.74■□□□□ 0.91
NME8Q8N427 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.74■□□□□ 0.91
NME8Q8N427 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
NME8Q8N427 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
NME8Q8N427 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
NME8Q8N427 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
NME8Q8N427 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.73■□□□□ 0.91
NME8Q8N427 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.73■□□□□ 0.91
NME8Q8N427 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
NME8Q8N427 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.73■□□□□ 0.91
NME8Q8N427 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.73■□□□□ 0.91
NME8Q8N427 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.73■□□□□ 0.91
NME8Q8N427 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
NME8Q8N427 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.73■□□□□ 0.91
NME8Q8N427 AC024243.1-201ENST00000609234 778 ntBASIC20.73■□□□□ 0.91
NME8Q8N427 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.73■□□□□ 0.91
NME8Q8N427 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
NME8Q8N427 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.73■□□□□ 0.91
NME8Q8N427 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.73■□□□□ 0.91
NME8Q8N427 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
NME8Q8N427 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
NME8Q8N427 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
NME8Q8N427 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.72■□□□□ 0.91
NME8Q8N427 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NME8Q8N427 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.72■□□□□ 0.91
NME8Q8N427 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.72■□□□□ 0.91
NME8Q8N427 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NME8Q8N427 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms