Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CROCCP3Q8IVE0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 PTBP1P-201ENST00000554374 1601 ntBASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 SLC7A5P2-201ENST00000553010 536 ntBASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 AL031963.3-201ENST00000606441 850 ntBASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 AL136162.1-201ENST00000607711 1078 ntBASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 AC135279.3-201ENST00000610945 1311 ntBASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 KRT8P20-201ENST00000423953 1409 ntBASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CROCCP3Q8IVE0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 TEX21P-204ENST00000641479 1693 ntBASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CROCCP3Q8IVE0 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CROCCP3Q8IVE0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CROCCP3Q8IVE0 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms