Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.39■□□□□ 0.37
TUBA1AQ71U36 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 PRORSD1P-201ENST00000295112 541 ntBASIC17.38■□□□□ 0.37
TUBA1AQ71U36 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 TMEM191A-211ENST00000637163 1067 ntBASIC17.38■□□□□ 0.37
TUBA1AQ71U36 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TUBA1AQ71U36 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 AC141586.3-201ENST00000562166 1838 ntBASIC17.37■□□□□ 0.37
TUBA1AQ71U36 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TUBA1AQ71U36 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.36■□□□□ 0.37
TUBA1AQ71U36 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms