Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.993e-9■■□□□ 12.8
LARP4Q71RC2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.93■□□□□ 0.942e-14■■□□□ 12.8
LARP4Q71RC2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.791e-8■■□□□ 12.8
LARP4Q71RC2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.56■□□□□ 0.721e-8■■□□□ 12.8
LARP4Q71RC2 DDA1-202ENST00000593466 757 ntTSL 318.54■□□□□ 0.561e-8■■□□□ 12.8
LARP4Q71RC2 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.12■□□□□ 0.491e-8■■□□□ 12.8
LARP4Q71RC2 THOP1-209ENST00000589087 2977 ntTSL 217.84■□□□□ 0.451e-8■■□□□ 12.8
LARP4Q71RC2 DDA1-204ENST00000596582 502 ntTSL 317.82■□□□□ 0.441e-8■■□□□ 12.8
LARP4Q71RC2 PSMD7-206ENST00000568717 1395 ntTSL 217.76■□□□□ 0.433e-9■■□□□ 12.8
LARP4Q71RC2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.391e-8■■□□□ 12.8
LARP4Q71RC2 SOAT2-202ENST00000542365 1797 ntTSL 217.44■□□□□ 0.381e-8■■□□□ 12.8
LARP4Q71RC2 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.221e-8■■□□□ 12.8
LARP4Q71RC2 THOP1-211ENST00000590970 1104 ntTSL 316.36■□□□□ 0.211e-8■■□□□ 12.8
LARP4Q71RC2 THOP1-213ENST00000591363 639 ntTSL 515.11■□□□□ 0.011e-8■■□□□ 12.8
LARP4Q71RC2 ST13-204ENST00000455824 798 ntTSL 514.95□□□□□ -0.021e-8■■□□□ 12.8
LARP4Q71RC2 ARPC5L-203ENST00000465124 1877 ntTSL 213.87□□□□□ -0.191e-8■■□□□ 12.8
LARP4Q71RC2 SCAMP3-208ENST00000490999 1011 ntTSL 213.75□□□□□ -0.212e-14■■□□□ 12.8
LARP4Q71RC2 DDA1-203ENST00000594501 398 ntTSL 212.88□□□□□ -0.351e-8■■□□□ 12.8
LARP4Q71RC2 ST13-205ENST00000480048 592 ntTSL 411.79□□□□□ -0.521e-8■■□□□ 12.8
LARP4Q71RC2 DDA1-201ENST00000359866 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.591e-8■■□□□ 12.8
LARP4Q71RC2 ST13-201ENST00000216218 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.61e-8■■□□□ 12.8
LARP4Q71RC2 NOL11-209ENST00000583108 2071 ntTSL 29.89□□□□□ -0.831e-8■■□□□ 12.8
LARP4Q71RC2 NOL11-201ENST00000253247 2947 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.91e-8■■□□□ 12.8
LARP4Q71RC2 ST13-207ENST00000620312 944 ntTSL 1 (best) BASIC7.97□□□□□ -1.131e-8■■□□□ 12.8
LARP4Q71RC2 NOL11-206ENST00000581375 2448 ntTSL 27.64□□□□□ -1.191e-8■■□□□ 12.8
LARP4Q71RC2 NOL11-210ENST00000584032 612 ntTSL 26.56□□□□□ -1.361e-8■■□□□ 12.8
LARP4Q71RC2 RBBP7-208ENST00000465244 4031 ntTSL 26.34□□□□□ -1.42e-14■■□□□ 12.8
LARP4Q71RC2 NOL11-208ENST00000583021 443 ntTSL 26.31□□□□□ -1.41e-8■■□□□ 12.8
LARP4Q71RC2 RTFDC1-206ENST00000477485 464 ntTSL 36.03□□□□□ -1.441e-8■■□□□ 12.8
LARP4Q71RC2 RBBP7-201ENST00000330735 858 ntTSL 25.85□□□□□ -1.472e-14■■□□□ 12.8
LARP4Q71RC2 RBBP7-206ENST00000425696 373 ntTSL 55.29□□□□□ -1.562e-14■■□□□ 12.8
LARP4Q71RC2 LDB1-204ENST00000490751 762 ntTSL 228.61■■■□□ 2.174e-6■■□□□ 12.8
LARP4Q71RC2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.554e-6■■□□□ 12.8
LARP4Q71RC2 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.422e-37■■□□□ 12.8
LARP4Q71RC2 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.424e-6■■□□□ 12.8
LARP4Q71RC2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC23.01■■□□□ 1.274e-6■■□□□ 12.8
LARP4Q71RC2 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.274e-6■■□□□ 12.8
LARP4Q71RC2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.114e-6■■□□□ 12.8
LARP4Q71RC2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.094e-6■■□□□ 12.8
LARP4Q71RC2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.074e-6■■□□□ 12.8
LARP4Q71RC2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.931e-7■■□□□ 12.8
LARP4Q71RC2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.894e-6■■□□□ 12.8
LARP4Q71RC2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.82■□□□□ 0.769e-8■■□□□ 12.8
LARP4Q71RC2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.754e-6■■□□□ 12.8
LARP4Q71RC2 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.644e-6■■□□□ 12.8
LARP4Q71RC2 HOXC6-204ENST00000509328 358 ntTSL 318.69■□□□□ 0.584e-6■■□□□ 12.8
LARP4Q71RC2 EGFL8-221ENST00000432129 825 ntTSL 518.4■□□□□ 0.544e-6■■□□□ 12.8
LARP4Q71RC2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.95■□□□□ 0.464e-6■■□□□ 12.8
LARP4Q71RC2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.93■□□□□ 0.464e-6■■□□□ 12.8
LARP4Q71RC2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.73■□□□□ 0.434e-6■■□□□ 12.8
LARP4Q71RC2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.7■□□□□ 0.424e-6■■□□□ 12.8
LARP4Q71RC2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.354e-6■■□□□ 12.8
LARP4Q71RC2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.344e-6■■□□□ 12.8
LARP4Q71RC2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.312e-8■■□□□ 12.8
LARP4Q71RC2 MTHFD1L-207ENST00000441122 1134 ntTSL 516.91■□□□□ 0.34e-6■■□□□ 12.8
LARP4Q71RC2 HNRNPL-212ENST00000601449 1918 ntTSL 516.84■□□□□ 0.292e-37■■□□□ 12.8
LARP4Q71RC2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.254e-6■■□□□ 12.8
LARP4Q71RC2 MTHFD1L-206ENST00000423867 524 ntTSL 216.57■□□□□ 0.244e-6■■□□□ 12.8
LARP4Q71RC2 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.224e-6■■□□□ 12.8
LARP4Q71RC2 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.194e-6■■□□□ 12.8
LARP4Q71RC2 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.154e-6■■□□□ 12.8
LARP4Q71RC2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.154e-6■■□□□ 12.8
LARP4Q71RC2 MTHFD1L-202ENST00000367308 996 ntTSL 515.89■□□□□ 0.134e-6■■□□□ 12.8
LARP4Q71RC2 TRIB3-203ENST00000449710 1070 ntTSL 515.83■□□□□ 0.124e-6■■□□□ 12.8
LARP4Q71RC2 ZHX1-C8orf76-202ENST00000622816 581 ntAPPRIS ALT2 TSL 415.49■□□□□ 0.074e-6■■□□□ 12.8
LARP4Q71RC2 PKP4-205ENST00000426248 4134 ntTSL 1 (best)15.35■□□□□ 0.054e-6■■□□□ 12.8
LARP4Q71RC2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.12■□□□□ 0.011e-12■■□□□ 12.8
LARP4Q71RC2 EGFL8-222ENST00000466239 2441 ntTSL 215.02■□□□□ -04e-6■■□□□ 12.8
LARP4Q71RC2 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.044e-6■■□□□ 12.8
LARP4Q71RC2 AES-210ENST00000590067 1100 ntTSL 214.8□□□□□ -0.049e-8■■□□□ 12.8
LARP4Q71RC2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.044e-6■■□□□ 12.8
LARP4Q71RC2 PLK1-209ENST00000570220 910 ntTSL 314.7□□□□□ -0.064e-6■■□□□ 12.8
LARP4Q71RC2 PLK1-204ENST00000564202 584 ntTSL 314.65□□□□□ -0.064e-6■■□□□ 12.8
LARP4Q71RC2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.134e-6■■□□□ 12.8
LARP4Q71RC2 BRIX1-204ENST00000510960 1161 ntTSL 214.07□□□□□ -0.164e-6■■□□□ 12.8
LARP4Q71RC2 PLK1-208ENST00000568568 582 ntTSL 313.96□□□□□ -0.174e-6■■□□□ 12.8
LARP4Q71RC2 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.24e-6■■□□□ 12.8
LARP4Q71RC2 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.67□□□□□ -0.224e-6■■□□□ 12.8
LARP4Q71RC2 HNRNPL-203ENST00000595164 2404 ntTSL 213.24□□□□□ -0.292e-37■■□□□ 12.8
LARP4Q71RC2 PLK1-207ENST00000567897 711 ntTSL 313.21□□□□□ -0.294e-6■■□□□ 12.8
LARP4Q71RC2 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC13.14□□□□□ -0.319e-7■■□□□ 12.8
LARP4Q71RC2 HOXC9-202ENST00000504557 581 ntTSL 313.04□□□□□ -0.324e-6■■□□□ 12.8
LARP4Q71RC2 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.364e-6■■□□□ 12.8
LARP4Q71RC2 HOXC6-203ENST00000504315 538 ntTSL 312.46□□□□□ -0.414e-6■■□□□ 12.8
LARP4Q71RC2 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.432e-8■■□□□ 12.8
LARP4Q71RC2 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.434e-6■■□□□ 12.8
LARP4Q71RC2 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.482e-8■■□□□ 12.8
LARP4Q71RC2 FAM96A-205ENST00000559705 636 ntTSL 311.63□□□□□ -0.554e-6■■□□□ 12.8
LARP4Q71RC2 ZNF714-206ENST00000613286 2696 ntTSL 1 (best)11.16□□□□□ -0.624e-6■■□□□ 12.8
LARP4Q71RC2 YBX3-213ENST00000542641 669 ntTSL 410.95□□□□□ -0.664e-6■■□□□ 12.8
LARP4Q71RC2 HNRNPL-202ENST00000388749 1952 ntTSL 510.76□□□□□ -0.692e-37■■□□□ 12.8
LARP4Q71RC2 ZHX1-206ENST00000522655 3357 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.74e-6■■□□□ 12.8
LARP4Q71RC2 YBX3-207ENST00000539204 649 ntTSL 310.7□□□□□ -0.74e-6■■□□□ 12.8
LARP4Q71RC2 BRIX1-205ENST00000515798 2196 ntTSL 210.58□□□□□ -0.724e-6■■□□□ 12.8
LARP4Q71RC2 AC115618.3-201ENST00000623114 425 ntBASIC10.49□□□□□ -0.734e-6■■□□□ 12.8
LARP4Q71RC2 YBX3-216ENST00000544622 685 ntTSL 310.43□□□□□ -0.744e-6■■□□□ 12.8
LARP4Q71RC2 HNRNPL-206ENST00000597731 3094 ntTSL 210.42□□□□□ -0.742e-37■■□□□ 12.8
LARP4Q71RC2 BRIX1-203ENST00000510834 2380 ntTSL 1 (best)10.38□□□□□ -0.754e-6■■□□□ 12.8
LARP4Q71RC2 ZNF714-205ENST00000610902 2671 ntTSL 210.08□□□□□ -0.84e-6■■□□□ 12.8
LARP4Q71RC2 PKP4-201ENST00000389757 5777 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.844e-6■■□□□ 12.8
Retrieved 100 of 15,922 protein–RNA pairs in 296.9 ms