Protein–RNA interactions for Protein: Q6TDU7

CASC1, Protein CASC1, humanhuman

Predictions only

Length 716 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1Q6TDU7 AC131212.4-201ENST00000623606 975 ntBASIC23.06■■□□□ 1.28
CASC1Q6TDU7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
CASC1Q6TDU7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 HR-201ENST00000312841 5351 ntTSL 5 BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 AL445675.2-201ENST00000620291 557 ntBASIC23.05■■□□□ 1.28
CASC1Q6TDU7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CASC1Q6TDU7 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 Z85996.1-201ENST00000494644 937 ntBASIC23.04■■□□□ 1.28
CASC1Q6TDU7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CASC1Q6TDU7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 AC104581.1-202ENST00000635932 2618 ntBASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 C1QBPP2-201ENST00000528754 825 ntBASIC23.03■■□□□ 1.28
CASC1Q6TDU7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CASC1Q6TDU7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 AC009113.1-201ENST00000570267 2443 ntBASIC23.02■■□□□ 1.28
CASC1Q6TDU7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 ABHD17AP1-201ENST00000358206 933 ntBASIC23.02■■□□□ 1.28
CASC1Q6TDU7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 AP002982.1-201ENST00000492365 877 ntBASIC23.02■■□□□ 1.28
CASC1Q6TDU7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 KATNBL1P6-202ENST00000562413 1466 ntBASIC23.02■■□□□ 1.28
CASC1Q6TDU7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC23.02■■□□□ 1.28
CASC1Q6TDU7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms