Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
KCNIP4Q6PIL6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 AF213884.3-201ENST00000563833 479 ntBASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 ANO7L1-203ENST00000602586 1720 ntBASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
KCNIP4Q6PIL6 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 AP001330.3-201ENST00000520123 633 ntBASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 AL139384.1-201ENST00000612143 3047 ntBASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
KCNIP4Q6PIL6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 AC110285.6-201ENST00000617652 491 ntBASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
KCNIP4Q6PIL6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms