Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL3Q6P499 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.19■□□□□ 0.34
NIPAL3Q6P499 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
NIPAL3Q6P499 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 LETM1P2-201ENST00000597330 2178 ntBASIC17.18■□□□□ 0.34
NIPAL3Q6P499 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.18■□□□□ 0.34
NIPAL3Q6P499 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 NIFKP9-201ENST00000419265 221 ntBASIC17.17■□□□□ 0.34
NIPAL3Q6P499 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NIPAL3Q6P499 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 FEM1AP3-201ENST00000403722 1741 ntBASIC17.16■□□□□ 0.34
NIPAL3Q6P499 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 AL135905.2-201ENST00000584934 1404 ntBASIC17.16■□□□□ 0.34
NIPAL3Q6P499 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.16■□□□□ 0.34
NIPAL3Q6P499 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 AF186192.3-201ENST00000583427 947 ntBASIC17.16■□□□□ 0.34
NIPAL3Q6P499 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NIPAL3Q6P499 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.15■□□□□ 0.34
NIPAL3Q6P499 BICD1-207ENST00000551848 1962 ntBASIC17.15■□□□□ 0.34
NIPAL3Q6P499 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms