Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 CR769767.2-201ENST00000622735 460 ntBASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRAMEF17Q5VTA0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 AL358472.4-201ENST00000633140 710 ntBASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRAMEF17Q5VTA0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRAMEF17Q5VTA0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRAMEF17Q5VTA0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.96■□□□□ 0.46
PRAMEF17Q5VTA0 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 AL023284.2-201ENST00000405850 579 ntBASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 GCSHP2-201ENST00000560971 527 ntBASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 LINC01238-205ENST00000567549 1107 ntBASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRAMEF17Q5VTA0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 AL031432.5-201ENST00000641059 760 ntBASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
PRAMEF17Q5VTA0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 AC036111.1-201ENST00000533973 1582 ntBASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.93■□□□□ 0.46
PRAMEF17Q5VTA0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms