Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 AC120498.9-201ENST00000339021 3867 ntBASIC16.57■□□□□ 0.24
FREM1Q5H8C1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.57■□□□□ 0.24
FREM1Q5H8C1 SEC1P-202ENST00000473944 940 ntBASIC16.57■□□□□ 0.24
FREM1Q5H8C1 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 COX11P1-201ENST00000489116 835 ntBASIC16.57■□□□□ 0.24
FREM1Q5H8C1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM1Q5H8C1 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 MIR4674-201ENST00000582457 87 ntBASIC16.56■□□□□ 0.24
FREM1Q5H8C1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM1Q5H8C1 FAM8A6P-201ENST00000407496 1135 ntBASIC16.55■□□□□ 0.24
FREM1Q5H8C1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 AL512604.3-201ENST00000569583 964 ntBASIC16.55■□□□□ 0.24
FREM1Q5H8C1 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.55■□□□□ 0.24
FREM1Q5H8C1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
FREM1Q5H8C1 RNF152P1-201ENST00000397754 604 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms