Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.83■□□□□ 0.45
RUNDC3AQ59EK9 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.83■□□□□ 0.45
RUNDC3AQ59EK9 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.83■□□□□ 0.45
RUNDC3AQ59EK9 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
RUNDC3AQ59EK9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RUNDC3AQ59EK9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RUNDC3AQ59EK9 KRT8P41-201ENST00000533985 1514 ntBASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 RCC2P6-201ENST00000526625 1557 ntBASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 NBPF21P-201ENST00000425093 1451 ntBASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RUNDC3AQ59EK9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 POM121L13P-201ENST00000422362 380 ntBASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 PRKY-204ENST00000533551 1019 ntBASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RUNDC3AQ59EK9 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RUNDC3AQ59EK9 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms