Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 GPAT2P1-201ENST00000444924 1672 ntBASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.84■□□□□ 0.77
PTPN20Q4JDL3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 MIR4674-201ENST00000582457 87 ntBASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 AL023803.3-201ENST00000615559 522 ntBASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN20Q4JDL3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN20Q4JDL3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPN20Q4JDL3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN20Q4JDL3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPN20Q4JDL3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 CYP2D8P-201ENST00000433633 1490 ntBASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 AL023284.2-201ENST00000405850 579 ntBASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN20Q4JDL3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PTPN20Q4JDL3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 AC008556.1-201ENST00000610908 2040 ntBASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 SLC25A1P2-201ENST00000430693 912 ntBASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN20Q4JDL3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms