Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 AC090192.1-201ENST00000517740 490 ntBASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.66■□□□□ 0.1
ANKRD55Q3KP44 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 KRT17P1-201ENST00000399211 1546 ntBASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 AC134043.2-201ENST00000624206 2238 ntBASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 KRT8P8-201ENST00000434750 1448 ntBASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 PRORSD1P-202ENST00000563365 2154 ntBASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 BCL2-203ENST00000589955 5011 ntBASIC15.65■□□□□ 0.1
ANKRD55Q3KP44 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ANKRD55Q3KP44 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.1
ANKRD55Q3KP44 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AC006970.2-201ENST00000450065 779 ntBASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AC008694.1-202ENST00000636953 945 ntBASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
ANKRD55Q3KP44 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms