Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 AL109659.2-201ENST00000606809 1674 ntBASIC17.55■□□□□ 0.4
PRICKLE4Q2TBC4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 AP003041.3-201ENST00000527151 707 ntBASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 AC116562.4-202ENST00000641738 218 ntBASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PRICKLE4Q2TBC4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 AC007663.1-201ENST00000438948 1240 ntBASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 MIR4674-201ENST00000582457 87 ntBASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.53■□□□□ 0.4
PRICKLE4Q2TBC4 ANO7L1-203ENST00000602586 1720 ntBASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 AC008556.1-201ENST00000610908 2040 ntBASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 INGX-201ENST00000359239 846 ntBASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 MCCD1P1-208ENST00000445732 328 ntBASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PRICKLE4Q2TBC4 AL138781.2-201ENST00000617896 1843 ntBASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 AC087499.1-201ENST00000418141 1075 ntBASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PRICKLE4Q2TBC4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms