Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 GUSBP12-201ENST00000513727 720 ntBASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 AL355877.3-201ENST00000622820 899 ntBASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RSPO4Q2I0M5 KRT18P28-201ENST00000453838 1332 ntBASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 POM121L3P-201ENST00000419331 1163 ntBASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 FAM8A3P-201ENST00000427218 844 ntBASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 DNAJB3-202ENST00000449667 1266 ntBASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 AC145285.3-201ENST00000564603 959 ntBASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 AP005901.3-202ENST00000581653 237 ntBASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RSPO4Q2I0M5 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 AL049796.1-201ENST00000565336 1766 ntBASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 RPS2P28-201ENST00000314255 741 ntBASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 AL035633.1-201ENST00000406139 838 ntBASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 CYMP-203ENST00000474680 1263 ntBASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 MIR3180-5-201ENST00000583743 153 ntBASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RSPO4Q2I0M5 FP700111.2-201ENST00000619190 1892 ntBASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RSPO4Q2I0M5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms