Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 HLA-V-201ENST00000429037 534 ntBASIC13.63□□□□□ -0.23
PRKDCP78527 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.63□□□□□ -0.23
PRKDCP78527 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKDCP78527 AC190387.1-201ENST00000551683 408 ntBASIC13.63□□□□□ -0.23
PRKDCP78527 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKDCP78527 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKDCP78527 NUS1P2-201ENST00000417358 873 ntBASIC13.63□□□□□ -0.23
PRKDCP78527 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKDCP78527 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKDCP78527 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKDCP78527 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.63□□□□□ -0.23
PRKDCP78527 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
PRKDCP78527 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 AF106564.1-201ENST00000607058 2553 ntBASIC13.63□□□□□ -0.23
PRKDCP78527 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
PRKDCP78527 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.63□□□□□ -0.23
PRKDCP78527 VENTXP7-201ENST00000475503 772 ntBASIC13.63□□□□□ -0.23
PRKDCP78527 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKDCP78527 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
PRKDCP78527 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.63□□□□□ -0.23
PRKDCP78527 AC138761.1-201ENST00000584393 385 ntBASIC13.63□□□□□ -0.23
PRKDCP78527 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRKDCP78527 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.63□□□□□ -0.23
PRKDCP78527 MYB-221ENST00000527615 2381 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKDCP78527 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
PRKDCP78527 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKDCP78527 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKDCP78527 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKDCP78527 AC040169.1-201ENST00000565382 521 ntBASIC13.62□□□□□ -0.23
PRKDCP78527 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKDCP78527 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKDCP78527 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKDCP78527 AC010240.3-201ENST00000607688 395 ntBASIC13.62□□□□□ -0.23
PRKDCP78527 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKDCP78527 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKDCP78527 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKDCP78527 MEIS3P1-201ENST00000495167 958 ntBASIC13.62□□□□□ -0.23
PRKDCP78527 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.62□□□□□ -0.23
PRKDCP78527 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.62□□□□□ -0.23
PRKDCP78527 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.62□□□□□ -0.23
PRKDCP78527 UNC93B6-202ENST00000528242 690 ntBASIC13.62□□□□□ -0.23
PRKDCP78527 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.62□□□□□ -0.23
PRKDCP78527 Z83851.2-201ENST00000609564 659 ntBASIC13.62□□□□□ -0.23
PRKDCP78527 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRKDCP78527 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.61□□□□□ -0.23
PRKDCP78527 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 MCCD1P2-201ENST00000423228 335 ntBASIC13.61□□□□□ -0.23
PRKDCP78527 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.61□□□□□ -0.23
PRKDCP78527 MCCD1P1-208ENST00000445732 328 ntBASIC13.61□□□□□ -0.23
PRKDCP78527 NME1-207ENST00000480143 964 ntTSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.61□□□□□ -0.23
PRKDCP78527 MIR3180-5-201ENST00000583743 153 ntBASIC13.61□□□□□ -0.23
PRKDCP78527 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 GUSBP5-202ENST00000510805 1989 ntBASIC13.61□□□□□ -0.23
PRKDCP78527 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
PRKDCP78527 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.61□□□□□ -0.23
PRKDCP78527 WWC2-AS2-201ENST00000578387 2183 ntBASIC13.61□□□□□ -0.23
PRKDCP78527 AC011467.4-201ENST00000594891 528 ntBASIC13.61□□□□□ -0.23
PRKDCP78527 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.61□□□□□ -0.23
PRKDCP78527 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
PRKDCP78527 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.61□□□□□ -0.23
PRKDCP78527 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PRKDCP78527 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC13.61□□□□□ -0.23
PRKDCP78527 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.61□□□□□ -0.23
PRKDCP78527 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.61□□□□□ -0.23
PRKDCP78527 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
PRKDCP78527 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.61□□□□□ -0.23
PRKDCP78527 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PRKDCP78527 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.6□□□□□ -0.23
PRKDCP78527 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PRKDCP78527 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms