Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 TMEM191A-211ENST00000637163 1067 ntBASIC16.48■□□□□ 0.23
HIST1H3AP68431 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.48■□□□□ 0.23
HIST1H3AP68431 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HIST1H3AP68431 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.48■□□□□ 0.23
HIST1H3AP68431 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 PENK-204ENST00000518770 863 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
HIST1H3AP68431 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
HIST1H3AP68431 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 WIZP1-201ENST00000531444 2299 ntBASIC16.46■□□□□ 0.23
HIST1H3AP68431 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 REXO1L10P-201ENST00000615707 1290 ntBASIC16.46■□□□□ 0.23
HIST1H3AP68431 REXO1L12P-201ENST00000622156 912 ntBASIC16.46■□□□□ 0.23
HIST1H3AP68431 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HIST1H3AP68431 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HIST1H3AP68431 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
HIST1H3AP68431 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.22
HIST1H3AP68431 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms