Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTA1P68133 AL133373.2-201ENST00000623187 2828 ntBASIC16.83■□□□□ 0.28
ACTA1P68133 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTA1P68133 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ACTA1P68133 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTA1P68133 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTA1P68133 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTA1P68133 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
ACTA1P68133 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
ACTA1P68133 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTA1P68133 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ACTA1P68133 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTA1P68133 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.82■□□□□ 0.28
ACTA1P68133 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.82■□□□□ 0.28
ACTA1P68133 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.82■□□□□ 0.28
ACTA1P68133 AC060766.5-201ENST00000590539 871 ntBASIC16.82■□□□□ 0.28
ACTA1P68133 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.82■□□□□ 0.28
ACTA1P68133 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ACTA1P68133 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.82■□□□□ 0.28
ACTA1P68133 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ACTA1P68133 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 PCDHB18P-201ENST00000524813 2368 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.81■□□□□ 0.28
ACTA1P68133 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTA1P68133 AC126763.1-201ENST00000552015 2118 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTA1P68133 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTA1P68133 AC006970.2-201ENST00000450065 779 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.81■□□□□ 0.28
ACTA1P68133 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 PNMA6B-201ENST00000538162 1200 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 AL121832.2-201ENST00000610979 668 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 AC120498.8-201ENST00000614275 531 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTA1P68133 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ACTA1P68133 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 AC068880.1-201ENST00000507289 2297 ntBASIC16.81■□□□□ 0.28
ACTA1P68133 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.81■□□□□ 0.28
ACTA1P68133 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ACTA1P68133 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ACTA1P68133 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.81■□□□□ 0.28
ACTA1P68133 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ACTA1P68133 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
ACTA1P68133 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.8■□□□□ 0.28
ACTA1P68133 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ACTA1P68133 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ACTA1P68133 TSPY23P-201ENST00000440136 739 ntBASIC16.8■□□□□ 0.28
ACTA1P68133 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.8■□□□□ 0.28
ACTA1P68133 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.8■□□□□ 0.28
ACTA1P68133 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms