Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
RPS28P62857 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RPS28P62857 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RPS28P62857 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
RPS28P62857 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RPS28P62857 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RPS28P62857 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC10.95□□□□□ -0.66
RPS28P62857 EI24-204ENST00000527235 1625 ntTSL 5 BASIC10.95□□□□□ -0.66
RPS28P62857 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 PXK-206ENST00000463280 2825 ntTSL 2 BASIC10.94□□□□□ -0.66
RPS28P62857 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC10.94□□□□□ -0.66
RPS28P62857 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC10.94□□□□□ -0.66
RPS28P62857 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC10.94□□□□□ -0.66
RPS28P62857 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC10.94□□□□□ -0.66
RPS28P62857 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
RPS28P62857 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 BANP-227ENST00000626016 2144 ntTSL 2 BASIC10.94□□□□□ -0.66
RPS28P62857 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC10.94□□□□□ -0.66
RPS28P62857 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC10.94□□□□□ -0.66
RPS28P62857 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC10.94□□□□□ -0.66
RPS28P62857 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RPS28P62857 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RPS28P62857 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
RPS28P62857 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RPS28P62857 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC10.93□□□□□ -0.66
RPS28P62857 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC10.93□□□□□ -0.66
RPS28P62857 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
RPS28P62857 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
RPS28P62857 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC10.93□□□□□ -0.66
RPS28P62857 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 AC006058.4-201ENST00000624016 1670 ntBASIC10.93□□□□□ -0.66
RPS28P62857 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
RPS28P62857 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
RPS28P62857 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC10.93□□□□□ -0.66
RPS28P62857 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RPS28P62857 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC10.93□□□□□ -0.66
RPS28P62857 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC10.92□□□□□ -0.66
RPS28P62857 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
RPS28P62857 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 OS9-205ENST00000413095 1660 ntTSL 2 BASIC10.92□□□□□ -0.66
RPS28P62857 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.92□□□□□ -0.66
RPS28P62857 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.92□□□□□ -0.66
RPS28P62857 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
RPS28P62857 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms