Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 AC068880.1-201ENST00000507289 2297 ntBASIC13.19□□□□□ -0.3
CKS1BP61024 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CKS1BP61024 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CKS1BP61024 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 AL138781.2-201ENST00000617896 1843 ntBASIC13.18□□□□□ -0.3
CKS1BP61024 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CKS1BP61024 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS1BP61024 CYP21A1P-202ENST00000354927 1481 ntBASIC13.18□□□□□ -0.3
CKS1BP61024 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS1BP61024 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS1BP61024 JTB-203ENST00000368589 1216 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS1BP61024 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.18□□□□□ -0.3
CKS1BP61024 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS1BP61024 AL031963.3-201ENST00000606441 850 ntBASIC13.18□□□□□ -0.3
CKS1BP61024 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC13.18□□□□□ -0.3
CKS1BP61024 SP2-202ENST00000613139 908 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS1BP61024 MYCNOS-205ENST00000641950 531 ntBASIC13.18□□□□□ -0.3
CKS1BP61024 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS1BP61024 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CKS1BP61024 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC13.18□□□□□ -0.3
CKS1BP61024 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS1BP61024 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CKS1BP61024 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.18□□□□□ -0.3
CKS1BP61024 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CKS1BP61024 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CKS1BP61024 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CKS1BP61024 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 RAB43-208ENST00000615093 783 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CKS1BP61024 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.17□□□□□ -0.3
CKS1BP61024 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.17□□□□□ -0.3
CKS1BP61024 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CKS1BP61024 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms