Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.84■□□□□ 0.77
ERVFC1P60507 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ERVFC1P60507 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ERVFC1P60507 KRT8P7-201ENST00000533003 1432 ntBASIC19.84■□□□□ 0.77
ERVFC1P60507 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERVFC1P60507 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.83■□□□□ 0.77
ERVFC1P60507 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERVFC1P60507 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERVFC1P60507 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ERVFC1P60507 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.83■□□□□ 0.77
ERVFC1P60507 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.83■□□□□ 0.77
ERVFC1P60507 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
ERVFC1P60507 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERVFC1P60507 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.83■□□□□ 0.77
ERVFC1P60507 AP002469.2-201ENST00000531724 424 ntBASIC19.83■□□□□ 0.77
ERVFC1P60507 AC074051.2-201ENST00000565115 352 ntBASIC19.83■□□□□ 0.77
ERVFC1P60507 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERVFC1P60507 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.83■□□□□ 0.77
ERVFC1P60507 AC090616.6-201ENST00000582640 721 ntBASIC19.83■□□□□ 0.77
ERVFC1P60507 SLC25A6P4-201ENST00000586535 553 ntBASIC19.83■□□□□ 0.77
ERVFC1P60507 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.83■□□□□ 0.77
ERVFC1P60507 AC138894.3-201ENST00000603787 634 ntBASIC19.83■□□□□ 0.77
ERVFC1P60507 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ERVFC1P60507 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
ERVFC1P60507 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ERVFC1P60507 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
ERVFC1P60507 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ERVFC1P60507 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ERVFC1P60507 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.83■□□□□ 0.76
ERVFC1P60507 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 TEX21P-204ENST00000641479 1693 ntBASIC19.82■□□□□ 0.76
ERVFC1P60507 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ERVFC1P60507 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ERVFC1P60507 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.82■□□□□ 0.76
ERVFC1P60507 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.82■□□□□ 0.76
ERVFC1P60507 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.82■□□□□ 0.76
ERVFC1P60507 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ERVFC1P60507 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.82■□□□□ 0.76
ERVFC1P60507 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.82■□□□□ 0.76
ERVFC1P60507 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.82■□□□□ 0.76
ERVFC1P60507 LINC00167-201ENST00000530583 1419 ntBASIC19.82■□□□□ 0.76
ERVFC1P60507 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ERVFC1P60507 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ERVFC1P60507 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ERVFC1P60507 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.81■□□□□ 0.76
ERVFC1P60507 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.81■□□□□ 0.76
ERVFC1P60507 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.81■□□□□ 0.76
ERVFC1P60507 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.81■□□□□ 0.76
ERVFC1P60507 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.81■□□□□ 0.76
ERVFC1P60507 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.81■□□□□ 0.76
ERVFC1P60507 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 MIR564-202ENST00000385049 94 ntBASIC19.81■□□□□ 0.76
ERVFC1P60507 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.81■□□□□ 0.76
ERVFC1P60507 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.81■□□□□ 0.76
ERVFC1P60507 KRT16P4-201ENST00000453883 522 ntBASIC19.81■□□□□ 0.76
ERVFC1P60507 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.81■□□□□ 0.76
ERVFC1P60507 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.81■□□□□ 0.76
ERVFC1P60507 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ERVFC1P60507 AC233702.3-201ENST00000578656 1387 ntBASIC19.81■□□□□ 0.76
ERVFC1P60507 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ERVFC1P60507 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ERVFC1P60507 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.81■□□□□ 0.76
ERVFC1P60507 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERVFC1P60507 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.81■□□□□ 0.76
ERVFC1P60507 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.8■□□□□ 0.76
ERVFC1P60507 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.8■□□□□ 0.76
ERVFC1P60507 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.8■□□□□ 0.76
ERVFC1P60507 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERVFC1P60507 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms