Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIST1H2BDP58876 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIST1H2BDP58876 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 AC005052.1-201ENST00000625181 2492 ntBASIC14.24□□□□□ -0.13
HIST1H2BDP58876 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.24□□□□□ -0.13
HIST1H2BDP58876 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.23□□□□□ -0.13
HIST1H2BDP58876 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms