Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB38P57729 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB38P57729 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
RAB38P57729 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB38P57729 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB38P57729 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB38P57729 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.73■□□□□ 0.43
RAB38P57729 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
RAB38P57729 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB38P57729 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
RAB38P57729 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB38P57729 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAB38P57729 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
RAB38P57729 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB38P57729 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 AL109659.2-201ENST00000606809 1674 ntBASIC17.72■□□□□ 0.43
RAB38P57729 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB38P57729 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB38P57729 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB38P57729 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB38P57729 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAB38P57729 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.72■□□□□ 0.43
RAB38P57729 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB38P57729 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAB38P57729 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAB38P57729 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.72■□□□□ 0.43
RAB38P57729 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAB38P57729 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
RAB38P57729 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.72■□□□□ 0.43
RAB38P57729 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAB38P57729 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RAB38P57729 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 AP000974.1-201ENST00000623909 2387 ntBASIC17.71■□□□□ 0.43
RAB38P57729 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB38P57729 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB38P57729 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 SLC25A3P1-201ENST00000443844 931 ntBASIC17.71■□□□□ 0.43
RAB38P57729 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB38P57729 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.71■□□□□ 0.43
RAB38P57729 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB38P57729 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.71■□□□□ 0.43
RAB38P57729 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.71■□□□□ 0.43
RAB38P57729 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB38P57729 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RAB38P57729 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB38P57729 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAB38P57729 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.71■□□□□ 0.43
RAB38P57729 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.71■□□□□ 0.43
RAB38P57729 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAB38P57729 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAB38P57729 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB38P57729 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB38P57729 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RAB38P57729 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAB38P57729 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RAB38P57729 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAB38P57729 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.7■□□□□ 0.42
RAB38P57729 ECEL1P3-201ENST00000427961 737 ntBASIC17.7■□□□□ 0.42
RAB38P57729 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.7■□□□□ 0.42
RAB38P57729 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
RAB38P57729 MIR3180-5-201ENST00000583743 153 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms