Protein–RNA interactions for Protein: P56945

BCAR1, Breast cancer anti-estrogen resistance protein 1, humanhuman

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR1P56945 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BCAR1P56945 KRT126P-201ENST00000549467 1181 ntBASIC20.4■□□□□ 0.86
BCAR1P56945 LINC01311-201ENST00000565162 1445 ntBASIC20.4■□□□□ 0.86
BCAR1P56945 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.4■□□□□ 0.86
BCAR1P56945 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BCAR1P56945 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BCAR1P56945 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.4■□□□□ 0.86
BCAR1P56945 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
BCAR1P56945 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BCAR1P56945 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BCAR1P56945 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BCAR1P56945 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.39■□□□□ 0.86
BCAR1P56945 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
BCAR1P56945 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.39■□□□□ 0.85
BCAR1P56945 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.39■□□□□ 0.85
BCAR1P56945 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
BCAR1P56945 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.39■□□□□ 0.85
BCAR1P56945 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
BCAR1P56945 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.39■□□□□ 0.85
BCAR1P56945 AC069148.1-201ENST00000608741 768 ntBASIC20.39■□□□□ 0.85
BCAR1P56945 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.39■□□□□ 0.85
BCAR1P56945 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.39■□□□□ 0.85
BCAR1P56945 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.39■□□□□ 0.85
BCAR1P56945 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BCAR1P56945 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.39■□□□□ 0.85
BCAR1P56945 AC007952.6-201ENST00000573168 2673 ntBASIC20.39■□□□□ 0.85
BCAR1P56945 AC003957.1-201ENST00000625108 2673 ntBASIC20.39■□□□□ 0.85
BCAR1P56945 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.38■□□□□ 0.85
BCAR1P56945 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
BCAR1P56945 AC116562.4-201ENST00000641316 2276 ntBASIC20.38■□□□□ 0.85
BCAR1P56945 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.38■□□□□ 0.85
BCAR1P56945 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.38■□□□□ 0.85
BCAR1P56945 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.38■□□□□ 0.85
BCAR1P56945 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.38■□□□□ 0.85
BCAR1P56945 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.38■□□□□ 0.85
BCAR1P56945 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BCAR1P56945 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BCAR1P56945 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
BCAR1P56945 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.37■□□□□ 0.85
BCAR1P56945 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.37■□□□□ 0.85
BCAR1P56945 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
BCAR1P56945 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.37■□□□□ 0.85
BCAR1P56945 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
BCAR1P56945 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BCAR1P56945 HCG4P8-203ENST00000443049 980 ntBASIC20.37■□□□□ 0.85
BCAR1P56945 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.37■□□□□ 0.85
BCAR1P56945 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.37■□□□□ 0.85
BCAR1P56945 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.37■□□□□ 0.85
BCAR1P56945 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
BCAR1P56945 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
BCAR1P56945 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.37■□□□□ 0.85
BCAR1P56945 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BCAR1P56945 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.36■□□□□ 0.85
BCAR1P56945 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.36■□□□□ 0.85
BCAR1P56945 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BCAR1P56945 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BCAR1P56945 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
BCAR1P56945 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
BCAR1P56945 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms