Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CLDN6P56747 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN6P56747 TSPY19P-201ENST00000418461 509 ntBASIC18.1■□□□□ 0.49
CLDN6P56747 TSPY18P-201ENST00000441642 509 ntBASIC18.1■□□□□ 0.49
CLDN6P56747 NUS1P1-201ENST00000446295 882 ntBASIC18.1■□□□□ 0.49
CLDN6P56747 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN6P56747 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN6P56747 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.1■□□□□ 0.49
CLDN6P56747 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN6P56747 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CLDN6P56747 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN6P56747 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.1■□□□□ 0.49
CLDN6P56747 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CLDN6P56747 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CLDN6P56747 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.1■□□□□ 0.49
CLDN6P56747 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN6P56747 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN6P56747 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN6P56747 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN6P56747 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CLDN6P56747 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN6P56747 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.09■□□□□ 0.49
CLDN6P56747 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.09■□□□□ 0.49
CLDN6P56747 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
CLDN6P56747 AL136038.4-201ENST00000603606 1261 ntBASIC18.09■□□□□ 0.49
CLDN6P56747 AC006538.3-201ENST00000612495 578 ntBASIC18.09■□□□□ 0.49
CLDN6P56747 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.09■□□□□ 0.49
CLDN6P56747 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLDN6P56747 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.49
CLDN6P56747 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN6P56747 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN6P56747 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN6P56747 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CLDN6P56747 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN6P56747 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLDN6P56747 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.08■□□□□ 0.49
CLDN6P56747 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN6P56747 TOB2P1-201ENST00000469761 992 ntBASIC18.08■□□□□ 0.48
CLDN6P56747 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CLDN6P56747 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.08■□□□□ 0.48
CLDN6P56747 AC091304.2-201ENST00000564639 760 ntBASIC18.08■□□□□ 0.48
CLDN6P56747 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CLDN6P56747 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 AC093525.10-201ENST00000625130 1569 ntBASIC18.08■□□□□ 0.48
CLDN6P56747 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 AL391807.1-203ENST00000604392 2365 ntBASIC18.08■□□□□ 0.48
CLDN6P56747 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLDN6P56747 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 ZNF815P-204ENST00000434898 1737 ntBASIC18.07■□□□□ 0.48
CLDN6P56747 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CLDN6P56747 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CLDN6P56747 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN6P56747 HLA-F-220ENST00000434407 884 ntBASIC18.07■□□□□ 0.48
CLDN6P56747 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN6P56747 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLDN6P56747 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.07■□□□□ 0.48
CLDN6P56747 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN6P56747 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.07■□□□□ 0.48
CLDN6P56747 AC138894.3-201ENST00000603787 634 ntBASIC18.07■□□□□ 0.48
CLDN6P56747 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms