Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC114341.1-201ENST00000618070 349 ntBASIC18.77■□□□□ 0.6
NUBP1P53384 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NUBP1P53384 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.77■□□□□ 0.6
NUBP1P53384 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUBP1P53384 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NUBP1P53384 FEM1AP1-201ENST00000431297 1995 ntBASIC18.77■□□□□ 0.59
NUBP1P53384 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.77■□□□□ 0.59
NUBP1P53384 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUBP1P53384 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUBP1P53384 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NUBP1P53384 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.76■□□□□ 0.59
NUBP1P53384 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
NUBP1P53384 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.76■□□□□ 0.59
NUBP1P53384 HOXB1-202ENST00000577092 1414 ntBASIC18.76■□□□□ 0.59
NUBP1P53384 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.76■□□□□ 0.59
NUBP1P53384 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.76■□□□□ 0.59
NUBP1P53384 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.76■□□□□ 0.59
NUBP1P53384 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.76■□□□□ 0.59
NUBP1P53384 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.76■□□□□ 0.59
NUBP1P53384 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
NUBP1P53384 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.76■□□□□ 0.59
NUBP1P53384 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
NUBP1P53384 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.76■□□□□ 0.59
NUBP1P53384 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.76■□□□□ 0.59
NUBP1P53384 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC18.76■□□□□ 0.59
NUBP1P53384 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
NUBP1P53384 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 AC134684.3-201ENST00000641758 218 ntBASIC18.76■□□□□ 0.59
NUBP1P53384 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NUBP1P53384 PLK5-205ENST00000642079 1969 ntBASIC18.75■□□□□ 0.59
NUBP1P53384 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
NUBP1P53384 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.75■□□□□ 0.59
NUBP1P53384 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.75■□□□□ 0.59
NUBP1P53384 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUBP1P53384 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
NUBP1P53384 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NUBP1P53384 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NUBP1P53384 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUBP1P53384 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.75■□□□□ 0.59
NUBP1P53384 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUBP1P53384 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.75■□□□□ 0.59
NUBP1P53384 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.75■□□□□ 0.59
NUBP1P53384 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC18.75■□□□□ 0.59
NUBP1P53384 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
NUBP1P53384 AC087273.1-201ENST00000519368 529 ntTSL 2 BASIC18.75■□□□□ 0.59
NUBP1P53384 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.75■□□□□ 0.59
NUBP1P53384 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.75■□□□□ 0.59
NUBP1P53384 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.75■□□□□ 0.59
NUBP1P53384 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.75■□□□□ 0.59
NUBP1P53384 AC048344.4-201ENST00000619744 527 ntBASIC18.75■□□□□ 0.59
NUBP1P53384 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NUBP1P53384 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUBP1P53384 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUBP1P53384 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NUBP1P53384 AC104109.2-201ENST00000602919 1418 ntBASIC18.74■□□□□ 0.59
NUBP1P53384 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NUBP1P53384 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NUBP1P53384 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NUBP1P53384 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.74■□□□□ 0.59
NUBP1P53384 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NUBP1P53384 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.74■□□□□ 0.59
NUBP1P53384 KRT89P-201ENST00000620027 1478 ntBASIC18.74■□□□□ 0.59
NUBP1P53384 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.74■□□□□ 0.59
NUBP1P53384 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.74■□□□□ 0.59
NUBP1P53384 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NUBP1P53384 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.74■□□□□ 0.59
NUBP1P53384 SMIM11A-201ENST00000399292 850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.74■□□□□ 0.59
NUBP1P53384 RN7SKP199-201ENST00000410325 305 ntBASIC18.74■□□□□ 0.59
NUBP1P53384 KRT18P3-201ENST00000451602 1288 ntBASIC18.74■□□□□ 0.59
NUBP1P53384 MIR583HG-201ENST00000507997 704 ntTSL 2 BASIC18.74■□□□□ 0.59
NUBP1P53384 HTR4-207ENST00000520514 1236 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC18.74■□□□□ 0.59
NUBP1P53384 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC18.74■□□□□ 0.59
NUBP1P53384 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NUBP1P53384 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NUBP1P53384 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.73■□□□□ 0.59
NUBP1P53384 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
NUBP1P53384 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NUBP1P53384 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms