Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HCFC1P51610 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.42■□□□□ 0.22
HCFC1P51610 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 TSPY22P-201ENST00000427496 604 ntBASIC16.42■□□□□ 0.22
HCFC1P51610 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.42■□□□□ 0.22
HCFC1P51610 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.42■□□□□ 0.22
HCFC1P51610 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.42■□□□□ 0.22
HCFC1P51610 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.42■□□□□ 0.22
HCFC1P51610 AL136038.4-201ENST00000603606 1261 ntBASIC16.42■□□□□ 0.22
HCFC1P51610 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCFC1P51610 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.42■□□□□ 0.22
HCFC1P51610 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.41■□□□□ 0.22
HCFC1P51610 AP000347.1-202ENST00000435868 847 ntBASIC16.41■□□□□ 0.22
HCFC1P51610 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.41■□□□□ 0.22
HCFC1P51610 MIR3917-201ENST00000580971 93 ntBASIC16.41■□□□□ 0.22
HCFC1P51610 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.41■□□□□ 0.22
HCFC1P51610 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1P51610 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HCFC1P51610 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1P51610 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.41■□□□□ 0.22
HCFC1P51610 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HCFC1P51610 TSPY12P-201ENST00000421279 868 ntBASIC16.41■□□□□ 0.22
HCFC1P51610 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.41■□□□□ 0.22
HCFC1P51610 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.41■□□□□ 0.22
HCFC1P51610 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.41■□□□□ 0.22
HCFC1P51610 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HCFC1P51610 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HCFC1P51610 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.41■□□□□ 0.22
HCFC1P51610 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCFC1P51610 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HCFC1P51610 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 AL845331.1-201ENST00000424978 1190 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC1P51610 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 TSSC2-201ENST00000450217 709 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC1P51610 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 SDHAP1-207ENST00000440850 2000 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 LINC00167-201ENST00000530583 1419 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1P51610 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HCFC1P51610 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCFC1P51610 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 TSPY19P-201ENST00000418461 509 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 TSPY18P-201ENST00000441642 509 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 AC009078.2-202ENST00000463353 338 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.4■□□□□ 0.22
HCFC1P51610 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.4■□□□□ 0.22
HCFC1P51610 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.4■□□□□ 0.22
HCFC1P51610 AC104692.2-201ENST00000603054 253 ntBASIC16.4■□□□□ 0.22
HCFC1P51610 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
HCFC1P51610 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.39■□□□□ 0.21
HCFC1P51610 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
HCFC1P51610 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCFC1P51610 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.39■□□□□ 0.21
HCFC1P51610 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1P51610 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1P51610 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1P51610 LBX2-AS1-202ENST00000603175 2083 ntBASIC16.39■□□□□ 0.21
HCFC1P51610 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1P51610 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1P51610 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
HCFC1P51610 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC16.39■□□□□ 0.21
HCFC1P51610 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.39■□□□□ 0.21
HCFC1P51610 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1P51610 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
HCFC1P51610 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms