Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.85■□□□□ 0.77
TUBP50607 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TUBP50607 TNXA-203ENST00000507684 2038 ntBASIC19.85■□□□□ 0.77
TUBP50607 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
TUBP50607 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TUBP50607 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
TUBP50607 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.85■□□□□ 0.77
TUBP50607 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.85■□□□□ 0.77
TUBP50607 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.85■□□□□ 0.77
TUBP50607 AC006011.2-201ENST00000621313 1158 ntBASIC19.85■□□□□ 0.77
TUBP50607 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TUBP50607 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
TUBP50607 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBP50607 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.84■□□□□ 0.77
TUBP50607 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.84■□□□□ 0.77
TUBP50607 AC104076.2-201ENST00000448912 469 ntBASIC19.84■□□□□ 0.77
TUBP50607 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TUBP50607 DUX4L26-201ENST00000489078 1255 ntBASIC19.84■□□□□ 0.77
TUBP50607 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
TUBP50607 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.84■□□□□ 0.77
TUBP50607 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.84■□□□□ 0.77
TUBP50607 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TUBP50607 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.84■□□□□ 0.77
TUBP50607 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.84■□□□□ 0.77
TUBP50607 AC005082.1-201ENST00000413042 2259 ntBASIC19.84■□□□□ 0.77
TUBP50607 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.84■□□□□ 0.77
TUBP50607 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TUBP50607 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.84■□□□□ 0.77
TUBP50607 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBP50607 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBP50607 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBP50607 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBP50607 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
TUBP50607 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBP50607 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.83■□□□□ 0.77
TUBP50607 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBP50607 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.83■□□□□ 0.77
TUBP50607 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TUBP50607 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.83■□□□□ 0.76
TUBP50607 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBP50607 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.83■□□□□ 0.76
TUBP50607 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TUBP50607 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
TUBP50607 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.82■□□□□ 0.76
TUBP50607 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.82■□□□□ 0.76
TUBP50607 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.82■□□□□ 0.76
TUBP50607 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.82■□□□□ 0.76
TUBP50607 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.82■□□□□ 0.76
TUBP50607 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.82■□□□□ 0.76
TUBP50607 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 AC141257.4-201ENST00000634557 245 ntBASIC19.82■□□□□ 0.76
TUBP50607 AC136944.6-201ENST00000634818 245 ntBASIC19.82■□□□□ 0.76
TUBP50607 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TUBP50607 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBP50607 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.81■□□□□ 0.76
TUBP50607 AL032819.2-201ENST00000624543 2162 ntBASIC19.81■□□□□ 0.76
TUBP50607 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TUBP50607 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBP50607 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms