Protein–RNA interactions for Protein: P49279

SLC11A1, Natural resistance-associated macrophage protein 1, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC11A1P49279 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC11A1P49279 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SLC11A1P49279 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC11A1P49279 MIR662-201ENST00000384847 95 ntBASIC20.04■□□□□ 0.8
SLC11A1P49279 MIR564-202ENST00000385049 94 ntBASIC20.04■□□□□ 0.8
SLC11A1P49279 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC11A1P49279 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
SLC11A1P49279 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 MIR3652-201ENST00000579335 131 ntBASIC20.04■□□□□ 0.8
SLC11A1P49279 AC010240.3-201ENST00000607688 395 ntBASIC20.04■□□□□ 0.8
SLC11A1P49279 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.04■□□□□ 0.8
SLC11A1P49279 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.04■□□□□ 0.8
SLC11A1P49279 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SLC11A1P49279 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC11A1P49279 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.04■□□□□ 0.8
SLC11A1P49279 KRT8P32-201ENST00000512863 1461 ntBASIC20.04■□□□□ 0.8
SLC11A1P49279 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.04■□□□□ 0.8
SLC11A1P49279 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SLC11A1P49279 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC11A1P49279 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SLC11A1P49279 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SLC11A1P49279 HOXB1-202ENST00000577092 1414 ntBASIC20.03■□□□□ 0.8
SLC11A1P49279 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC11A1P49279 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
SLC11A1P49279 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC11A1P49279 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC11A1P49279 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC11A1P49279 AC026396.1-201ENST00000419388 421 ntBASIC20.03■□□□□ 0.8
SLC11A1P49279 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC11A1P49279 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC11A1P49279 KRT8P26-201ENST00000534154 1276 ntBASIC20.03■□□□□ 0.8
SLC11A1P49279 AC104390.1-201ENST00000555663 520 ntBASIC20.03■□□□□ 0.8
SLC11A1P49279 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC11A1P49279 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.03■□□□□ 0.8
SLC11A1P49279 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC11A1P49279 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.03■□□□□ 0.8
SLC11A1P49279 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.03■□□□□ 0.8
SLC11A1P49279 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SLC11A1P49279 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLC11A1P49279 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC11A1P49279 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
SLC11A1P49279 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SLC11A1P49279 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC11A1P49279 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.02■□□□□ 0.8
SLC11A1P49279 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SLC11A1P49279 RNF126P1-202ENST00000569893 925 ntBASIC20.02■□□□□ 0.8
SLC11A1P49279 AP002414.4-201ENST00000589764 1148 ntBASIC20.02■□□□□ 0.8
SLC11A1P49279 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.02■□□□□ 0.8
SLC11A1P49279 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.02■□□□□ 0.8
SLC11A1P49279 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SLC11A1P49279 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SLC11A1P49279 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SLC11A1P49279 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC11A1P49279 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC11A1P49279 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC11A1P49279 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC11A1P49279 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SLC11A1P49279 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC11A1P49279 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC11A1P49279 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC11A1P49279 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.02■□□□□ 0.79
SLC11A1P49279 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SLC11A1P49279 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SLC11A1P49279 KRT8P7-201ENST00000533003 1432 ntBASIC20.02■□□□□ 0.79
SLC11A1P49279 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SLC11A1P49279 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms