Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SSR1P43307 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
SSR1P43307 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.04■□□□□ 0.8
SSR1P43307 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SSR1P43307 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SSR1P43307 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SSR1P43307 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SSR1P43307 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.03■□□□□ 0.8
SSR1P43307 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.03■□□□□ 0.8
SSR1P43307 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.03■□□□□ 0.8
SSR1P43307 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.03■□□□□ 0.8
SSR1P43307 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
SSR1P43307 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
SSR1P43307 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
SSR1P43307 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR1P43307 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SSR1P43307 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SSR1P43307 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.02■□□□□ 0.8
SSR1P43307 CROCCP3-202ENST00000420820 1947 ntBASIC20.02■□□□□ 0.8
SSR1P43307 KRT16P5-201ENST00000455284 522 ntBASIC20.02■□□□□ 0.8
SSR1P43307 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.02■□□□□ 0.8
SSR1P43307 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.02■□□□□ 0.8
SSR1P43307 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR1P43307 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.8
SSR1P43307 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SSR1P43307 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.79
SSR1P43307 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR1P43307 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSR1P43307 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SSR1P43307 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SSR1P43307 FEM1AP3-201ENST00000403722 1741 ntBASIC20.02■□□□□ 0.79
SSR1P43307 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR1P43307 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SSR1P43307 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
SSR1P43307 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SSR1P43307 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
SSR1P43307 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.01■□□□□ 0.79
SSR1P43307 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SSR1P43307 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SSR1P43307 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.01■□□□□ 0.79
SSR1P43307 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.01■□□□□ 0.79
SSR1P43307 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.01■□□□□ 0.79
SSR1P43307 RN7SL471P-201ENST00000580476 299 ntBASIC20.01■□□□□ 0.79
SSR1P43307 MIR4651-201ENST00000582622 73 ntBASIC20.01■□□□□ 0.79
SSR1P43307 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SSR1P43307 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.01■□□□□ 0.79
SSR1P43307 AC124016.1-201ENST00000609552 612 ntBASIC20.01■□□□□ 0.79
SSR1P43307 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.01■□□□□ 0.79
SSR1P43307 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SSR1P43307 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.01■□□□□ 0.79
SSR1P43307 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SSR1P43307 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR1P43307 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.01■□□□□ 0.79
SSR1P43307 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SSR1P43307 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20■□□□□ 0.79
SSR1P43307 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR1P43307 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20■□□□□ 0.79
SSR1P43307 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms